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Cluster: HRGMv2_0187_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_20 HRGMv2_0187_20_1 636 1964 - 2.A.25.1.9
CAZyme HRGMv2_0187_20 HRGMv2_0187_20_2 2026 3090 - GH171
pfam HRGMv2_0187_20 HRGMv2_0187_20_3 3408 4868 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam HRGMv2_0187_20 HRGMv2_0187_20_4 4880 5299 - ATP-synt_C | ATP-synt_C
TC HRGMv2_0187_20 HRGMv2_0187_20_5 5323 7161 - 3.A.2.3.3
pfam HRGMv2_0187_20 HRGMv2_0187_20_6 7154 7780 - ATP-synt_D
TC HRGMv2_0187_20 HRGMv2_0187_20_7 7780 9102 - 3.A.2.3.3
TC HRGMv2_0187_20 HRGMv2_0187_20_8 9092 10846 - 3.A.2.3.3
Gene ID: HRGMv2_0187_20_1
Type: TC
Location: 636 - 1964 (-)
Gene ID: HRGMv2_0187_20_2
Type: CAZyme
Location: 2026 - 3090 (-)
Gene ID: HRGMv2_0187_20_3
Type: pfam
Location: 3408 - 4868 (-)
Gene ID: HRGMv2_0187_20_4
Type: pfam
Location: 4880 - 5299 (-)
Gene ID: HRGMv2_0187_20_5
Type: TC
Location: 5323 - 7161 (-)
Gene ID: HRGMv2_0187_20_6
Type: pfam
Location: 7154 - 7780 (-)
Gene ID: HRGMv2_0187_20_7
Type: TC
Location: 7780 - 9102 (-)
Gene ID: HRGMv2_0187_20_8
Type: TC
Location: 9092 - 10846 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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