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Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3405931_bin.18
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Caproicibacterium
→
Species
Caproicibacterium amylolyticum
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3405931_bin.18 2,822,951 98.65% 0.335% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3405931_bin.18_CGC37 CGCFAM_00133 Yes 10 4
ShaoY_2019_ERR3405931_bin.18_CGC30 CGCFAM_00196 Yes 4 1
ShaoY_2019_ERR3405931_bin.18_CGC39 CGCFAM_00202 Yes 3 1
ShaoY_2019_ERR3405931_bin.18_CGC13 CGCFAM_00204 Yes 8 1
ShaoY_2019_ERR3405931_bin.18_CGC10 CGCFAM_00586 Yes 7 4
ShaoY_2019_ERR3405931_bin.18_CGC2 CGCFAM_00973 Yes 4 1
ShaoY_2019_ERR3405931_bin.18_CGC29 CGCFAM_01147 Yes 3 1
ShaoY_2019_ERR3405931_bin.18_CGC36 CGCFAM_01252 Yes 4 1 alpha-glucan
ShaoY_2019_ERR3405931_bin.18_CGC46 CGCFAM_02506 Yes 7 1
ShaoY_2019_ERR3405931_bin.18_CGC3 CGCFAM_02856 Yes 9 1
ShaoY_2019_ERR3405931_bin.18_CGC7 CGCFAM_03030 Yes 9 4
ShaoY_2019_ERR3405931_bin.18_CGC35 CGCFAM_03118 Yes 6 1
ShaoY_2019_ERR3405931_bin.18_CGC21 CGCFAM_03580 Yes 6 2
ShaoY_2019_ERR3405931_bin.18_CGC5 CGCFAM_03790 Yes 6 2
ShaoY_2019_ERR3405931_bin.18_CGC12 CGCFAM_04884 Yes 11 4
ShaoY_2019_ERR3405931_bin.18_CGC42 CGCFAM_10708 Yes 7 1
ShaoY_2019_ERR3405931_bin.18_CGC25 CGCFAM_11311 Yes 4 1
Top CAZyme Families