Cluster: ShaoY_2019_ERR3405931_bin.18_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- CGC Family ID: CGCFAM_03790
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_269 | 269085 | 269942 | + | 3.A.1.132.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_270 | 269939 | 270688 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_271 | 270791 | 271084 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_272 | 271159 | 272394 | - | GT4 |
| pfam | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_273 | 272391 | 273485 | - | Epimerase_2 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_274 | 273508 | 274608 | - | GH177 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_269
Type: TC
Location: 269085 - 269942 (+)
Type: TC
Location: 269085 - 269942 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_270
Type:
Location: 269939 - 270688 (+)
Type:
Location: 269939 - 270688 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_271
Type:
Location: 270791 - 271084 (+)
Type:
Location: 270791 - 271084 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_272
Type: CAZyme
Location: 271159 - 272394 (-)
Type: CAZyme
Location: 271159 - 272394 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_273
Type: pfam
Location: 272391 - 273485 (-)
Type: pfam
Location: 272391 - 273485 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_274
Type: CAZyme
Location: 273508 - 274608 (-)
Type: CAZyme
Location: 273508 - 274608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.