Cluster: ShaoY_2019_ERR3405931_bin.18_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- CGC Family ID: CGCFAM_02506
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_313 | 316131 | 318938 | - | 3.A.5.1.3 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_314 | 319140 | 319553 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_315 | 319768 | 320247 | - | 4.A.1.1.1 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_316 | 320231 | 321901 | - | 8.A.7.1.1 |
| STP | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_317 | 321914 | 322171 | - | PTS-HPr |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_318 | 322216 | 323262 | - | GH170 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_319 | 323277 | 324707 | - | 4.A.1.2.7 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_313
Type: TC
Location: 316131 - 318938 (-)
Type: TC
Location: 316131 - 318938 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_314
Type:
Location: 319140 - 319553 (-)
Type:
Location: 319140 - 319553 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_315
Type: TC
Location: 319768 - 320247 (-)
Type: TC
Location: 319768 - 320247 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_316
Type: TC
Location: 320231 - 321901 (-)
Type: TC
Location: 320231 - 321901 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_317
Type: STP
Location: 321914 - 322171 (-)
Type: STP
Location: 321914 - 322171 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_318
Type: CAZyme
Location: 322216 - 323262 (-)
Type: CAZyme
Location: 322216 - 323262 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_319
Type: TC
Location: 323277 - 324707 (-)
Type: TC
Location: 323277 - 324707 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.