Cluster: ShaoY_2019_ERR3405931_bin.18_CGC39
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- CGC Family ID: CGCFAM_00202
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_15 | 17723 | 18622 | - | 3.A.1.131.3 |
| TF | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_16 | 18615 | 19085 | - | GntR |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_17 | 19172 | 20479 | - | GH27 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_15
Type: TC
Location: 17723 - 18622 (-)
Type: TC
Location: 17723 - 18622 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_16
Type: TF
Location: 18615 - 19085 (-)
Type: TF
Location: 18615 - 19085 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_17
Type: CAZyme
Location: 19172 - 20479 (-)
Type: CAZyme
Location: 19172 - 20479 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.