Cluster: ShaoY_2019_ERR3405931_bin.18_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- CGC Family ID: CGCFAM_00973
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_3710 | ShaoY_2019_ERR3405931_bin.18_k141_3710_11 | 10294 | 12354 | - | GH31_1 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_3710 | ShaoY_2019_ERR3405931_bin.18_k141_3710_12 | 12448 | 13314 | - | 3.A.1.1.45 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_3710 | ShaoY_2019_ERR3405931_bin.18_k141_3710_13 | 13314 | 14177 | - | 3.A.1.1.45 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_3710 | ShaoY_2019_ERR3405931_bin.18_k141_3710_14 | 14297 | 15685 | - | 3.A.1.1.45 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_3710_11
Type: CAZyme
Location: 10294 - 12354 (-)
Type: CAZyme
Location: 10294 - 12354 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_3710_12
Type: TC
Location: 12448 - 13314 (-)
Type: TC
Location: 12448 - 13314 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_3710_13
Type: TC
Location: 13314 - 14177 (-)
Type: TC
Location: 13314 - 14177 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_3710_14
Type: TC
Location: 14297 - 15685 (-)
Type: TC
Location: 14297 - 15685 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.