Cluster: ShaoY_2019_ERR3405931_bin.18_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- CGC Family ID: CGCFAM_11311
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_188 | 209695 | 210498 | + | 3.A.1.17.5 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_189 | 210495 | 211109 | + | 3.A.1.16.4 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_190 | 211450 | 213381 | + | 9.B.18.2.1 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_191 | 213479 | 214186 | + | CE4 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_188
Type: TC
Location: 209695 - 210498 (+)
Type: TC
Location: 209695 - 210498 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_189
Type: TC
Location: 210495 - 211109 (+)
Type: TC
Location: 210495 - 211109 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_190
Type: TC
Location: 211450 - 213381 (+)
Type: TC
Location: 211450 - 213381 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_191
Type: CAZyme
Location: 213479 - 214186 (+)
Type: CAZyme
Location: 213479 - 214186 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.