Cluster: ShaoY_2019_ERR3405931_bin.18_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- CGC Family ID: CGCFAM_00196
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_494 | 524772 | 526694 | - | 3.A.1.135.5 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_495 | 526687 | 528438 | - | 3.A.1.135.5 |
| TF | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_496 | 528478 | 528921 | - | MarR |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_497 | 529121 | 531388 | - | GH146 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_494
Type: TC
Location: 524772 - 526694 (-)
Type: TC
Location: 524772 - 526694 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_495
Type: TC
Location: 526687 - 528438 (-)
Type: TC
Location: 526687 - 528438 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_496
Type: TF
Location: 528478 - 528921 (-)
Type: TF
Location: 528478 - 528921 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_497
Type: CAZyme
Location: 529121 - 531388 (-)
Type: CAZyme
Location: 529121 - 531388 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.