Cluster: ShaoY_2019_ERR3405931_bin.18_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- CGC Family ID: CGCFAM_01252
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_25271 | ShaoY_2019_ERR3405931_bin.18_k141_25271_66 | 88226 | 90622 | - | GH31_15 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_25271 | ShaoY_2019_ERR3405931_bin.18_k141_25271_67 | 90701 | 92323 | - | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_25271 | ShaoY_2019_ERR3405931_bin.18_k141_25271_68 | 92369 | 93295 | - | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_25271 | ShaoY_2019_ERR3405931_bin.18_k141_25271_69 | 93306 | 94250 | - | 3.A.1.1.10 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_25271_66
Type: CAZyme
Location: 88226 - 90622 (-)
Type: CAZyme
Location: 88226 - 90622 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_25271_67
Type: TC
Location: 90701 - 92323 (-)
Type: TC
Location: 90701 - 92323 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_25271_68
Type: TC
Location: 92369 - 93295 (-)
Type: TC
Location: 92369 - 93295 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_25271_69
Type: TC
Location: 93306 - 94250 (-)
Type: TC
Location: 93306 - 94250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.