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Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3405833_bin.12
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Clostridiales
→
Family
Clostridiaceae
→
Genus
Clostridium
→
Species
Clostridium sp018372875
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3405833_bin.12 3,445,915 99.19% 0% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3405833_bin.12_CGC2 CGCFAM_00003 Yes 13 3
ShaoY_2019_ERR3405833_bin.12_CGC41 CGCFAM_00012 Yes 7 4 host glycan/beta-glucan
ShaoY_2019_ERR3405833_bin.12_CGC18 CGCFAM_00027 Yes 3 1
ShaoY_2019_ERR3405833_bin.12_CGC3 CGCFAM_00132 Yes 7 4
ShaoY_2019_ERR3405833_bin.12_CGC8 CGCFAM_02341 Yes 4 1
ShaoY_2019_ERR3405833_bin.12_CGC22 CGCFAM_02957 Yes 13 5
ShaoY_2019_ERR3405833_bin.12_CGC1 CGCFAM_03612 Yes 6 1
ShaoY_2019_ERR3405833_bin.12_CGC29 CGCFAM_04092 Yes 5 1
ShaoY_2019_ERR3405833_bin.12_CGC7 CGCFAM_06158 Yes 4 2
ShaoY_2019_ERR3405833_bin.12_CGC6 CGCFAM_08151 Yes 4 2
ShaoY_2019_ERR3405833_bin.12_CGC5 CGCFAM_08152 Yes 8 1
ShaoY_2019_ERR3405833_bin.12_CGC10 CGCFAM_08155 Yes 8 1
ShaoY_2019_ERR3405833_bin.12_CGC43 CGCFAM_08157 Yes 10 1
ShaoY_2019_ERR3405833_bin.12_CGC38 CGCFAM_08158 Yes 11 3
Top CAZyme Families