Cluster: ShaoY_2019_ERR3405833_bin.12_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- CGC Family ID: CGCFAM_02341
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_181 | 187976 | 189163 | - | GH23 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_182 | 189218 | 189589 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_183 | 189586 | 190140 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_184 | 190142 | 192037 | - | 3.A.7.13.2 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_181
Type: CAZyme
Location: 187976 - 189163 (-)
Type: CAZyme
Location: 187976 - 189163 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_182
Type:
Location: 189218 - 189589 (-)
Type:
Location: 189218 - 189589 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_183
Type:
Location: 189586 - 190140 (-)
Type:
Location: 189586 - 190140 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_184
Type: TC
Location: 190142 - 192037 (-)
Type: TC
Location: 190142 - 192037 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.