PROTEIN: ShaoY_2019_ERR3405833_bin.12_k141_3672_183
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405833_bin.12_k141_3672_183.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405833_bin.12_k141_3672_183
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Protein Sequence
MNKKLLTIIL VIIIVFFSII IFIPSKENSD ELSSLENENT NSITNENSPG ESDEKYNIDD 60 LENTKEIALK FAELIYSVDS KEPLKFPEQS VKYTTEALKE RIIAVANTEE LEVYKRDVES 120 VEVIESKYDD IEDSIMWNVE AYANVFDESG NLTNKEKGDI NILFSKENGV YRVSEYSIER 180 KEKN 184
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F4H2-F1-model_v4 | 48 | 180 | 71 | 206 | 0.5279 |
0.771 |
| AF-O24879-F1-model_v4 | 40 | 184 | 59 | 244 | 0.5043 |
0.7297 |
| AF-X8F5F6-F1-model_v4 | 25 | 180 | 35 | 259 | 0.4988 |
0.6932 |
| AF-K0F2D4-F1-model_v4 | 15 | 177 | 16 | 204 | 0.4895 |
0.5968 |
| AF-I6X7G4-F1-model_v4 | 48 | 180 | 98 | 239 | 0.4886 |
0.7591 |
| AF-X8FII7-F1-model_v4 | 1 | 180 | 103 | 316 | 0.4858 |
0.6428 |
| AF-O25265-F1-model_v4 | 56 | 184 | 85 | 231 | 0.4758 |
0.7684 |
| AF-X8F1S5-F1-model_v4 | 57 | 180 | 213 | 338 | 0.4378 |
0.8233 |
| AF-I1MC65-F1-model_v4 | 40 | 181 | 609 | 794 | 0.3288 |
0.6744 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WM00-F1-model_v4 | 7 | 179 | 7 | 220 | 0.5237 |
0.623 |
| AF-Q6FYW3-F1-model_v4 | 56 | 184 | 94 | 234 | 0.4906 |
0.7761 |
| AF-Q6G2B4-F1-model_v4 | 56 | 184 | 94 | 234 | 0.4882 |
0.772 |
| AF-Q9RPX7-F1-model_v4 | 40 | 184 | 53 | 238 | 0.4876 |
0.699 |
| AF-Q7W2U0-F1-model_v4 | 58 | 184 | 92 | 233 | 0.4837 |
0.7735 |
| AF-Q7VSX6-F1-model_v4 | 58 | 184 | 92 | 233 | 0.4827 |
0.7722 |
| AF-Q7WDT8-F1-model_v4 | 57 | 184 | 91 | 233 | 0.4817 |
0.7633 |
| AF-P55403-F1-model_v4 | 57 | 182 | 82 | 220 | 0.4769 |
0.7492 |
| AF-Q2YJ78-F1-model_v4 | 41 | 184 | 54 | 238 | 0.4761 |
0.6856 |
| AF-P0C532-F1-model_v4 | 43 | 184 | 57 | 239 | 0.4756 |
0.6939 |