Cluster: ShaoY_2019_ERR3405833_bin.12_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- CGC Family ID: CGCFAM_06158
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_102 | 109688 | 110395 | + | GT26 |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_103 | 110418 | 111635 | + | Wzy_C |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_104 | 111699 | 113105 | + | 2.A.66.12.4 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_105 | 113111 | 114229 | + | GT4 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_102
Type: CAZyme
Location: 109688 - 110395 (+)
Type: CAZyme
Location: 109688 - 110395 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_103
Type: pfam
Location: 110418 - 111635 (+)
Type: pfam
Location: 110418 - 111635 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_104
Type: TC
Location: 111699 - 113105 (+)
Type: TC
Location: 111699 - 113105 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_105
Type: CAZyme
Location: 113111 - 114229 (+)
Type: CAZyme
Location: 113111 - 114229 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.