Cluster: ShaoY_2019_ERR3405833_bin.12_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- CGC Family ID: CGCFAM_03612
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_1750 | ShaoY_2019_ERR3405833_bin.12_k141_1750_44 | 52170 | 53288 | - | GH172 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405833_bin.12_k141_1750 | ShaoY_2019_ERR3405833_bin.12_k141_1750_45 | 53310 | 55565 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_1750 | ShaoY_2019_ERR3405833_bin.12_k141_1750_46 | 55594 | 56418 | - | 4.A.6.1.19 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_1750 | ShaoY_2019_ERR3405833_bin.12_k141_1750_47 | 56442 | 57248 | - | 4.A.6.1.19 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_1750 | ShaoY_2019_ERR3405833_bin.12_k141_1750_48 | 57287 | 57772 | - | 4.A.6.1.19 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_1750 | ShaoY_2019_ERR3405833_bin.12_k141_1750_49 | 57791 | 58207 | - | 4.A.6.1.8 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_1750_44
Type: CAZyme
Location: 52170 - 53288 (-)
Type: CAZyme
Location: 52170 - 53288 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_1750_45
Type:
Location: 53310 - 55565 (-)
Type:
Location: 53310 - 55565 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_1750_46
Type: TC
Location: 55594 - 56418 (-)
Type: TC
Location: 55594 - 56418 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_1750_47
Type: TC
Location: 56442 - 57248 (-)
Type: TC
Location: 56442 - 57248 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_1750_48
Type: TC
Location: 57287 - 57772 (-)
Type: TC
Location: 57287 - 57772 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_1750_49
Type: TC
Location: 57791 - 58207 (-)
Type: TC
Location: 57791 - 58207 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.