Cluster: ShaoY_2019_ERR3405833_bin.12_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- CGC Family ID: CGCFAM_00027
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405833_bin.12_k141_7689 | ShaoY_2019_ERR3405833_bin.12_k141_7689_7 | 6236 | 7561 | + | 2.A.66.1.22 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_7689 | ShaoY_2019_ERR3405833_bin.12_k141_7689_8 | 7717 | 9114 | - | GH1 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_7689 | ShaoY_2019_ERR3405833_bin.12_k141_7689_9 | 9134 | 10993 | - | 4.A.1.2.11 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7689_7
Type: TC
Location: 6236 - 7561 (+)
Type: TC
Location: 6236 - 7561 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7689_8
Type: CAZyme
Location: 7717 - 9114 (-)
Type: CAZyme
Location: 7717 - 9114 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7689_9
Type: TC
Location: 9134 - 10993 (-)
Type: TC
Location: 9134 - 10993 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.