Cluster: ShaoY_2019_ERR3405833_bin.12_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- CGC Family ID: CGCFAM_08151
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_55 | 55931 | 58387 | + | GH18 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_56 | 58405 | 60900 | + | CBM5 | GH18 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_57 | 61063 | 62334 | + | 2.A.23.1.8 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_3672 | ShaoY_2019_ERR3405833_bin.12_k141_3672_58 | 62493 | 63224 | + | 3.A.1.115.1 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_55
Type: CAZyme
Location: 55931 - 58387 (+)
Type: CAZyme
Location: 55931 - 58387 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_56
Type: CAZyme
Location: 58405 - 60900 (+)
Type: CAZyme
Location: 58405 - 60900 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_57
Type: TC
Location: 61063 - 62334 (+)
Type: TC
Location: 61063 - 62334 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_3672_58
Type: TC
Location: 62493 - 63224 (+)
Type: TC
Location: 62493 - 63224 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.