Cluster: ShaoY_2019_ERR3405833_bin.12_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- CGC Family ID: CGCFAM_08155
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_14 | 15556 | 18285 | + | 3.A.23.1.1 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_15 | 18518 | 18826 | + | 4.A.3.2.8 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_16 | 18908 | 19204 | + | 4.A.3.2.8 |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_17 | 19335 | 20228 | + | BcrAD_BadFG |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_18 | 20248 | 21336 | + | GH170 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_19 | 21599 | 22957 | + | 2.A.66.1.28 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_20 | 23043 | 23444 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_4283 | ShaoY_2019_ERR3405833_bin.12_k141_4283_21 | 23558 | 24664 | + | 9.A.28.1.2 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_14
Type: TC
Location: 15556 - 18285 (+)
Type: TC
Location: 15556 - 18285 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_15
Type: TC
Location: 18518 - 18826 (+)
Type: TC
Location: 18518 - 18826 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_16
Type: TC
Location: 18908 - 19204 (+)
Type: TC
Location: 18908 - 19204 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_17
Type: pfam
Location: 19335 - 20228 (+)
Type: pfam
Location: 19335 - 20228 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_18
Type: CAZyme
Location: 20248 - 21336 (+)
Type: CAZyme
Location: 20248 - 21336 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_19
Type: TC
Location: 21599 - 22957 (+)
Type: TC
Location: 21599 - 22957 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_20
Type:
Location: 23043 - 23444 (+)
Type:
Location: 23043 - 23444 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4283_21
Type: TC
Location: 23558 - 24664 (+)
Type: TC
Location: 23558 - 24664 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.