Cluster: ShaoY_2019_ERR3405833_bin.12_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- CGC Family ID: CGCFAM_00132
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_2228 | ShaoY_2019_ERR3405833_bin.12_k141_2228_51 | 61120 | 61935 | - | GT2 |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_2228 | ShaoY_2019_ERR3405833_bin.12_k141_2228_52 | 62180 | 63592 | + | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_2228 | ShaoY_2019_ERR3405833_bin.12_k141_2228_53 | 63632 | 64657 | + | GT2 |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_2228 | ShaoY_2019_ERR3405833_bin.12_k141_2228_54 | 64674 | 66092 | + | Wzy_C |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_2228 | ShaoY_2019_ERR3405833_bin.12_k141_2228_55 | 66103 | 67065 | + | GT2 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_2228 | ShaoY_2019_ERR3405833_bin.12_k141_2228_56 | 67307 | 68662 | + | 9.B.18.1.3 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_2228 | ShaoY_2019_ERR3405833_bin.12_k141_2228_57 | 68813 | 71989 | + | GH73 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_2228_51
Type: CAZyme
Location: 61120 - 61935 (-)
Type: CAZyme
Location: 61120 - 61935 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_2228_52
Type: pfam
Location: 62180 - 63592 (+)
Type: pfam
Location: 62180 - 63592 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_2228_53
Type: CAZyme
Location: 63632 - 64657 (+)
Type: CAZyme
Location: 63632 - 64657 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_2228_54
Type: pfam
Location: 64674 - 66092 (+)
Type: pfam
Location: 64674 - 66092 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_2228_55
Type: CAZyme
Location: 66103 - 67065 (+)
Type: CAZyme
Location: 66103 - 67065 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_2228_56
Type: TC
Location: 67307 - 68662 (+)
Type: TC
Location: 67307 - 68662 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_2228_57
Type: CAZyme
Location: 68813 - 71989 (+)
Type: CAZyme
Location: 68813 - 71989 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.