dbCAN Logo

Genome Details

Selected Rep_genome_ID: SPMP06_bin.48
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides caccae
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A91.bin_28 5,027,424 97.79% 1.09% China(Inner Mongolia) Asia IMGG
CGMR059151 4,628,453 98.3% 0.51% China Asia CGMR
KY177_bin.57 4,892,211 97.73% 0.35% NA Africa H3AfricaPhase2
Rep_498 4,909,298 99.2718% 0.701187% NA NA WIS
SPMP06_bin.48 4,700,715 98.81% 0.24% Singapore Asia SPMP
SPMP50_bin.35 4,364,421 91.01% 0.81% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
SPMP06_bin.48_CGC11 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SPMP06_bin.48_CGC42 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SPMP06_bin.48_CGC68 CGCFAM_00001 Yes 8 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SPMP06_bin.48_CGC77 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SPMP06_bin.48_CGC3 CGCFAM_00002 Yes 9 6
SPMP06_bin.48_CGC39 CGCFAM_00005 Yes 10 4
SPMP06_bin.48_CGC52 CGCFAM_00017 Yes 7 4 fructan
SPMP06_bin.48_CGC31 CGCFAM_00061 Yes 5 2
SPMP06_bin.48_CGC7 CGCFAM_00147 Yes 3 2
SPMP06_bin.48_CGC10 CGCFAM_00158 Yes 10 4
SPMP06_bin.48_CGC14 CGCFAM_00158 Yes 11 3
SPMP06_bin.48_CGC59 CGCFAM_00158 Yes 8 4
SPMP06_bin.48_CGC55 CGCFAM_00189 Yes 9 2
SPMP06_bin.48_CGC30 CGCFAM_00217 Yes 17 12
SPMP06_bin.48_CGC2 CGCFAM_00251 Yes 7 3
SPMP06_bin.48_CGC65 CGCFAM_00332 Yes 5 3
SPMP06_bin.48_CGC27 CGCFAM_00363 Yes 14 4
SPMP06_bin.48_CGC17 CGCFAM_00647 Yes 10 6
SPMP06_bin.48_CGC58 CGCFAM_00720 Yes 17 6 host glycan
SPMP06_bin.48_CGC24 CGCFAM_00756 Yes 3 2
PUL0666_SPMP06_bin.48_C3 CGCFAM_00830 Yes 3 3 pectin
SPMP06_bin.48_CGC36 CGCFAM_00940 Yes 5 2
SPMP06_bin.48_CGC25 CGCFAM_00982 Yes 9 3
SPMP06_bin.48_CGC46 CGCFAM_00985 Yes 20 6
SPMP06_bin.48_CGC54 CGCFAM_00986 Yes 6 3
Top CAZyme Families