Cluster: SPMP06_bin.48_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: SPMP06_bin.48
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_191936 | opera_contig_191936_2 | 157 | 1143 | - | GT2 |
| CAZyme | opera_contig_191936 | opera_contig_191936_3 | 1258 | 2367 | + | GT4 |
| NULL(UNKNOWN) | opera_contig_191936 | opera_contig_191936_4 | 2360 | 3304 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_191936 | opera_contig_191936_5 | 3395 | 4159 | + | GT2 |
| CAZyme | opera_contig_191936 | opera_contig_191936_6 | 4185 | 5330 | - | GT4 |
| TC | opera_contig_191936 | opera_contig_191936_7 | 5449 | 6912 | - | 1.C.39.13.1 |
| NULL(UNKNOWN) | opera_contig_191936 | opera_contig_191936_8 | 6930 | 7085 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_191936 | opera_contig_191936_9 | 7524 | 8507 | - | GT2 |
| CAZyme | opera_contig_191936 | opera_contig_191936_10 | 8714 | 9511 | + | GT2 |
Gene ID: opera_contig_191936_2
Type: CAZyme
Location: 157 - 1143 (-)
Type: CAZyme
Location: 157 - 1143 (-)
Gene ID: opera_contig_191936_3
Type: CAZyme
Location: 1258 - 2367 (+)
Type: CAZyme
Location: 1258 - 2367 (+)
Gene ID: opera_contig_191936_4
Type:
Location: 2360 - 3304 (+)
Type:
Location: 2360 - 3304 (+)
Gene ID: opera_contig_191936_5
Type: CAZyme
Location: 3395 - 4159 (+)
Type: CAZyme
Location: 3395 - 4159 (+)
Gene ID: opera_contig_191936_6
Type: CAZyme
Location: 4185 - 5330 (-)
Type: CAZyme
Location: 4185 - 5330 (-)
Gene ID: opera_contig_191936_7
Type: TC
Location: 5449 - 6912 (-)
Type: TC
Location: 5449 - 6912 (-)
Gene ID: opera_contig_191936_8
Type:
Location: 6930 - 7085 (-)
Type:
Location: 6930 - 7085 (-)
Gene ID: opera_contig_191936_9
Type: CAZyme
Location: 7524 - 8507 (-)
Type: CAZyme
Location: 7524 - 8507 (-)
Gene ID: opera_contig_191936_10
Type: CAZyme
Location: 8714 - 9511 (+)
Type: CAZyme
Location: 8714 - 9511 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.