Cluster: SPMP06_bin.48_CGC39
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP06_bin.48
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_191938 | opera_contig_191938_131 | 163921 | 166341 | - | 8.A.3.3.4 |
| TC | opera_contig_191938 | opera_contig_191938_132 | 166352 | 167137 | - | 1.B.18.3.3 |
| TC | opera_contig_191938 | opera_contig_191938_133 | 167158 | 167784 | - | 9.B.18.1.3 |
| CAZyme | opera_contig_191938 | opera_contig_191938_134 | 167805 | 168617 | - | GT2 |
| NULL(UNKNOWN) | opera_contig_191938 | opera_contig_191938_135 | 168916 | 169296 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_191938 | opera_contig_191938_136 | 169307 | 170176 | - | GT11 |
| CAZyme | opera_contig_191938 | opera_contig_191938_137 | 170191 | 170982 | - | GT6 |
| pfam | opera_contig_191938 | opera_contig_191938_138 | 170986 | 172209 | - | EpsG |
| pfam | opera_contig_191938 | opera_contig_191938_139 | 172303 | 173157 | - | EpsG |
| CAZyme | opera_contig_191938 | opera_contig_191938_140 | 173145 | 174329 | - | GT4 |
Gene ID: opera_contig_191938_131
Type: TC
Location: 163921 - 166341 (-)
Type: TC
Location: 163921 - 166341 (-)
Gene ID: opera_contig_191938_132
Type: TC
Location: 166352 - 167137 (-)
Type: TC
Location: 166352 - 167137 (-)
Gene ID: opera_contig_191938_133
Type: TC
Location: 167158 - 167784 (-)
Type: TC
Location: 167158 - 167784 (-)
Gene ID: opera_contig_191938_134
Type: CAZyme
Location: 167805 - 168617 (-)
Type: CAZyme
Location: 167805 - 168617 (-)
Gene ID: opera_contig_191938_135
Type:
Location: 168916 - 169296 (-)
Type:
Location: 168916 - 169296 (-)
Gene ID: opera_contig_191938_136
Type: CAZyme
Location: 169307 - 170176 (-)
Type: CAZyme
Location: 169307 - 170176 (-)
Gene ID: opera_contig_191938_137
Type: CAZyme
Location: 170191 - 170982 (-)
Type: CAZyme
Location: 170191 - 170982 (-)
Gene ID: opera_contig_191938_138
Type: pfam
Location: 170986 - 172209 (-)
Type: pfam
Location: 170986 - 172209 (-)
Gene ID: opera_contig_191938_139
Type: pfam
Location: 172303 - 173157 (-)
Type: pfam
Location: 172303 - 173157 (-)
Gene ID: opera_contig_191938_140
Type: CAZyme
Location: 173145 - 174329 (-)
Type: CAZyme
Location: 173145 - 174329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.