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Cluster: SPMP06_bin.48_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_191939 opera_contig_191939_377 468021 469190 - 2.A.1.7.17
CAZyme opera_contig_191939 opera_contig_191939_378 469533 471359 - GH32
CAZyme opera_contig_191939 opera_contig_191939_379 471485 473437 - GH91
CAZyme opera_contig_191939 opera_contig_191939_380 473475 474584 - GH91
pfam opera_contig_191939 opera_contig_191939_381 474631 476388 - SusD_RagB | SusD-like_3
TC opera_contig_191939 opera_contig_191939_382 476414 479485 - 1.B.14.6.1
CAZyme opera_contig_191939 opera_contig_191939_383 479656 481518 - GH32
Gene ID: opera_contig_191939_377
Type: TC
Location: 468021 - 469190 (-)
Gene ID: opera_contig_191939_378
Type: CAZyme
Location: 469533 - 471359 (-)
Gene ID: opera_contig_191939_379
Type: CAZyme
Location: 471485 - 473437 (-)
Gene ID: opera_contig_191939_380
Type: CAZyme
Location: 473475 - 474584 (-)
Gene ID: opera_contig_191939_381
Type: pfam
Location: 474631 - 476388 (-)
Gene ID: opera_contig_191939_382
Type: TC
Location: 476414 - 479485 (-)
Gene ID: opera_contig_191939_383
Type: CAZyme
Location: 479656 - 481518 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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