Cluster: SPMP06_bin.48_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: SPMP06_bin.48
- CGC Family ID: CGCFAM_00647
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_191936 | opera_contig_191936_335 | 493166 | 494596 | + | GH29 |
| CAZyme | opera_contig_191936 | opera_contig_191936_336 | 494616 | 496724 | + | GH2 |
| TC | opera_contig_191936 | opera_contig_191936_337 | 496834 | 500298 | + | 1.B.14.6.1 |
| pfam | opera_contig_191936 | opera_contig_191936_338 | 500328 | 502355 | + | SusD_RagB | SusD-like_3 |
| CAZyme | opera_contig_191936 | opera_contig_191936_339 | 502500 | 504902 | + | CBM32 |
| pfam | opera_contig_191936 | opera_contig_191936_340 | 504943 | 506061 | + | F5_F8_type_C |
| CAZyme | opera_contig_191936 | opera_contig_191936_341 | 506243 | 508966 | + | GH2 |
| pfam | opera_contig_191936 | opera_contig_191936_342 | 508969 | 509739 | + | BetaGal_ABD2 | BetaGal_ABD_1 | BetaGal_gal-bd |
| CAZyme | opera_contig_191936 | opera_contig_191936_343 | 509857 | 513726 | + | GH31_18 |
| CAZyme | opera_contig_191936 | opera_contig_191936_344 | 513897 | 516812 | + | GH105 | PL33_2 |
Gene ID: opera_contig_191936_335
Type: CAZyme
Location: 493166 - 494596 (+)
Type: CAZyme
Location: 493166 - 494596 (+)
Gene ID: opera_contig_191936_336
Type: CAZyme
Location: 494616 - 496724 (+)
Type: CAZyme
Location: 494616 - 496724 (+)
Gene ID: opera_contig_191936_337
Type: TC
Location: 496834 - 500298 (+)
Type: TC
Location: 496834 - 500298 (+)
Gene ID: opera_contig_191936_338
Type: pfam
Location: 500328 - 502355 (+)
Type: pfam
Location: 500328 - 502355 (+)
Gene ID: opera_contig_191936_339
Type: CAZyme
Location: 502500 - 504902 (+)
Type: CAZyme
Location: 502500 - 504902 (+)
Gene ID: opera_contig_191936_340
Type: pfam
Location: 504943 - 506061 (+)
Type: pfam
Location: 504943 - 506061 (+)
Gene ID: opera_contig_191936_341
Type: CAZyme
Location: 506243 - 508966 (+)
Type: CAZyme
Location: 506243 - 508966 (+)
Gene ID: opera_contig_191936_342
Type: pfam
Location: 508969 - 509739 (+)
Type: pfam
Location: 508969 - 509739 (+)
Gene ID: opera_contig_191936_343
Type: CAZyme
Location: 509857 - 513726 (+)
Type: CAZyme
Location: 509857 - 513726 (+)
Gene ID: opera_contig_191936_344
Type: CAZyme
Location: 513897 - 516812 (+)
Type: CAZyme
Location: 513897 - 516812 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_191936_339 | vegan > omnivore | 1.17919 | 0.01246 |