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Cluster: SPMP06_bin.48_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_51 opera_contig_51_27 41372 42214 + 8.A.5.1.6
CAZyme opera_contig_51 opera_contig_51_28 42342 44276 - GH97
CAZyme opera_contig_51 opera_contig_51_29 44853 46259 - GH28
CAZyme opera_contig_51 opera_contig_51_30 46256 49024 - PL40
TC opera_contig_51 opera_contig_51_31 49188 51095 + 3.D.1.5.1
STP opera_contig_51 opera_contig_51_32 51107 52873 + Fer4
TC opera_contig_51 opera_contig_51_33 52892 53368 + 3.D.1.5.1
Gene ID: opera_contig_51_27
Type: TC
Location: 41372 - 42214 (+)
Gene ID: opera_contig_51_28
Type: CAZyme
Location: 42342 - 44276 (-)
Gene ID: opera_contig_51_29
Type: CAZyme
Location: 44853 - 46259 (-)
Gene ID: opera_contig_51_30
Type: CAZyme
Location: 46256 - 49024 (-)
Gene ID: opera_contig_51_31
Type: TC
Location: 49188 - 51095 (+)
Gene ID: opera_contig_51_32
Type: STP
Location: 51107 - 52873 (+)
Gene ID: opera_contig_51_33
Type: TC
Location: 52892 - 53368 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_51_27 vegan > omnivore 1.46669 0.01246
opera_contig_51_29 vegan > omnivore 1.01367 0.01246

🧭 Explore Read Mapping of CGC

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