Cluster: SPMP06_bin.48_CGC25
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP06_bin.48
- CGC Family ID: CGCFAM_00982
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_191937 | opera_contig_191937_66 | 97691 | 99430 | - | CE12 | CE8 |
| NULL(UNKNOWN) | opera_contig_191937 | opera_contig_191937_67 | 99532 | 99666 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_191937 | opera_contig_191937_68 | 99678 | 100655 | - | CE8 |
| CAZyme | opera_contig_191937 | opera_contig_191937_69 | 100659 | 101858 | - | GH105 |
| TC | opera_contig_191937 | opera_contig_191937_70 | 102158 | 103558 | + | 4.A.5.1.4 |
| pfam | opera_contig_191937 | opera_contig_191937_71 | 103593 | 104513 | + | KduI |
| TC | opera_contig_191937 | opera_contig_191937_72 | 104770 | 106218 | + | 2.A.1.14.25 |
| pfam | opera_contig_191937 | opera_contig_191937_73 | 106580 | 109933 | - | DEAD | ResIII | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30 |
| TC | opera_contig_191937 | opera_contig_191937_74 | 110000 | 110803 | - | 2.A.64.1.2 |
Gene ID: opera_contig_191937_66
Type: CAZyme
Location: 97691 - 99430 (-)
Type: CAZyme
Location: 97691 - 99430 (-)
Gene ID: opera_contig_191937_67
Type:
Location: 99532 - 99666 (-)
Type:
Location: 99532 - 99666 (-)
Gene ID: opera_contig_191937_68
Type: CAZyme
Location: 99678 - 100655 (-)
Type: CAZyme
Location: 99678 - 100655 (-)
Gene ID: opera_contig_191937_69
Type: CAZyme
Location: 100659 - 101858 (-)
Type: CAZyme
Location: 100659 - 101858 (-)
Gene ID: opera_contig_191937_70
Type: TC
Location: 102158 - 103558 (+)
Type: TC
Location: 102158 - 103558 (+)
Gene ID: opera_contig_191937_71
Type: pfam
Location: 103593 - 104513 (+)
Type: pfam
Location: 103593 - 104513 (+)
Gene ID: opera_contig_191937_72
Type: TC
Location: 104770 - 106218 (+)
Type: TC
Location: 104770 - 106218 (+)
Gene ID: opera_contig_191937_73
Type: pfam
Location: 106580 - 109933 (-)
Type: pfam
Location: 106580 - 109933 (-)
Gene ID: opera_contig_191937_74
Type: TC
Location: 110000 - 110803 (-)
Type: TC
Location: 110000 - 110803 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.