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Cluster: SPMP06_bin.48_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_191942 opera_contig_191942_127 152826 153506 + 2.A.88.8.5
pfam opera_contig_191942 opera_contig_191942_128 153551 154210 + QueC
pfam opera_contig_191942 opera_contig_191942_129 154654 155109 + QueF
CAZyme opera_contig_191942 opera_contig_191942_130 155387 158065 + GH2
CAZyme opera_contig_191942 opera_contig_191942_131 158152 161016 - CBM32
CAZyme opera_contig_191942 opera_contig_191942_132 161103 162455 - CBM32
pfam opera_contig_191942 opera_contig_191942_133 162502 164415 - SusD_RagB | SusD-like_3
TC opera_contig_191942 opera_contig_191942_134 164436 167645 - 1.B.14.6.1
Gene ID: opera_contig_191942_127
Type: TC
Location: 152826 - 153506 (+)
Gene ID: opera_contig_191942_128
Type: pfam
Location: 153551 - 154210 (+)
Gene ID: opera_contig_191942_129
Type: pfam
Location: 154654 - 155109 (+)
Gene ID: opera_contig_191942_130
Type: CAZyme
Location: 155387 - 158065 (+)
Gene ID: opera_contig_191942_131
Type: CAZyme
Location: 158152 - 161016 (-)
Gene ID: opera_contig_191942_132
Type: CAZyme
Location: 161103 - 162455 (-)
Gene ID: opera_contig_191942_133
Type: pfam
Location: 162502 - 164415 (-)
Gene ID: opera_contig_191942_134
Type: TC
Location: 164436 - 167645 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_191942_132 vegan > omnivore 1.26347 0.01246

🧭 Explore Read Mapping of CGC

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