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Cluster: SPMP06_bin.48_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_191940 opera_contig_191940_188 195905 197830 + 9.B.18.2.1
TC opera_contig_191940 opera_contig_191940_189 197847 198677 + 1.B.18.3.3
TC opera_contig_191940 opera_contig_191940_190 198687 201107 + 8.A.3.3.4
NULL(UNKNOWN) opera_contig_191940 opera_contig_191940_191 201124 201222 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) opera_contig_191940 opera_contig_191940_192 201275 201469 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_191940 opera_contig_191940_193 201641 202555 + GT2
pfam opera_contig_191940 opera_contig_191940_194 202564 203637 + Acyl_transf_3
TC opera_contig_191940 opera_contig_191940_195 203640 204902 + 2.A.66.2.10
CAZyme opera_contig_191940 opera_contig_191940_196 204909 205994 + GT4
Gene ID: opera_contig_191940_188
Type: TC
Location: 195905 - 197830 (+)
Gene ID: opera_contig_191940_189
Type: TC
Location: 197847 - 198677 (+)
Gene ID: opera_contig_191940_190
Type: TC
Location: 198687 - 201107 (+)
Gene ID: opera_contig_191940_191
Type:
Location: 201124 - 201222 (+)
Gene ID: opera_contig_191940_192
Type:
Location: 201275 - 201469 (+)
Gene ID: opera_contig_191940_193
Type: CAZyme
Location: 201641 - 202555 (+)
Gene ID: opera_contig_191940_194
Type: pfam
Location: 202564 - 203637 (+)
Gene ID: opera_contig_191940_195
Type: TC
Location: 203640 - 204902 (+)
Gene ID: opera_contig_191940_196
Type: CAZyme
Location: 204909 - 205994 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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