Genome Details
Selected Rep_genome_ID: Rep_490
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A58.bin_6 | 6,031,310 | 99.46% | 0.08% | China(Inner Mongolia) | Asia | IMGG |
| BF194_bin.5 | 6,057,052 | 99.41% | 0.08% | NA | Africa | H3AfricaPhase2 |
| CGMR068028 | 5,720,273 | 99.14% | 0.35% | China | Asia | CGMR |
| Rep_490 | 6,220,636 | 99.4144% | 0.0809062% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_490_CGC50 | CGCFAM_02928 | Yes | 8 | 4 | alpha-mannan |
| Rep_490_CGC83 | CGCFAM_03107 | Yes | 9 | 1 | |
| Rep_490_CGC101 | CGCFAM_03109 | Yes | 9 | 1 | |
| Rep_490_CGC28 | CGCFAM_03881 | Yes | 18 | 5 | |
| PUL0563_Rep_490_C0 | CGCFAM_04144 | Yes | 14 | 7 | arabinogalactan |
| Rep_490_CGC66 | CGCFAM_04167 | Yes | 9 | 1 | |
| PUL0464_Rep_490_C0 | CGCFAM_04168 | Yes | 15 | 8 | host glycan |
| Rep_490_CGC88 | CGCFAM_04313 | Yes | 4 | 1 | |
| Rep_490_CGC95 | CGCFAM_04411 | Yes | 15 | 8 | |
| Rep_490_CGC7 | CGCFAM_04547 | Yes | 7 | 3 | |
| PUL0162_Rep_490_C0 | CGCFAM_06394 | Yes | 12 | 2 | alpha-mannan |
| PUL0377_Rep_490_C0 | CGCFAM_06425 | Yes | 26 | 5 | host glycan |
| PUL0026_Rep_490_C1 | CGCFAM_06460 | Yes | 8 | 1 | simple sugar |
| PUL0560_Rep_490_C0 | CGCFAM_06462 | Yes | 27 | 4 | arabinogalactan |
| Rep_490_CGC90 | CGCFAM_08779 | Yes | 12 | 2 | |
| Rep_490_CGC60 | CGCFAM_09037 | Yes | 23 | 11 | |
| Rep_490_CGC31 | CGCFAM_10510 | Yes | 13 | 6 | |
| Rep_490_CGC24 | CGCFAM_10935 | Yes | 10 | 3 |
Top CAZyme Families