Cluster: Rep_490_CGC95
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_04411
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_490_c_3 | Rep_490_c_3_36 | 61595 | 63691 | + | GH127 |
| CAZyme | Rep_490_c_3 | Rep_490_c_3_37 | 63711 | 65570 | + | GH141 |
| CAZyme | Rep_490_c_3 | Rep_490_c_3_38 | 65591 | 67780 | + | GH78 |
| pfam | Rep_490_c_3 | Rep_490_c_3_39 | 67986 | 70394 | + | FtsX | FtsX |
| pfam | Rep_490_c_3 | Rep_490_c_3_40 | 70877 | 71422 | - | Acetyltransf_1 | Acetyltransf_3 |
| TC | Rep_490_c_3 | Rep_490_c_3_41 | 71462 | 73894 | - | 2.A.21.9.2 |
| NULL(UNKNOWN) | Rep_490_c_3 | Rep_490_c_3_42 | 73980 | 74099 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_490_c_3 | Rep_490_c_3_43 | 74114 | 76813 | + | GH138 |
| CAZyme | Rep_490_c_3 | Rep_490_c_3_44 | 76966 | 81204 | + | CBM57 | CBM97 | GH137 | GH2 |
| TF | Rep_490_c_3 | Rep_490_c_3_45 | 81418 | 82263 | + | HTH_AraC |
| TC | Rep_490_c_3 | Rep_490_c_3_46 | 82260 | 83759 | - | 2.A.21.9.1 |
| pfam | Rep_490_c_3 | Rep_490_c_3_47 | 84073 | 85590 | - | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 |
| CAZyme | Rep_490_c_3 | Rep_490_c_3_48 | 85741 | 87303 | + | GH2 |
| CAZyme | Rep_490_c_3 | Rep_490_c_3_49 | 87333 | 89018 | + | GH2 |
| CAZyme | Rep_490_c_3 | Rep_490_c_3_50 | 89070 | 91922 | + | GH2 |
Gene ID: Rep_490_c_3_36
Type: CAZyme
Location: 61595 - 63691 (+)
Type: CAZyme
Location: 61595 - 63691 (+)
Gene ID: Rep_490_c_3_37
Type: CAZyme
Location: 63711 - 65570 (+)
Type: CAZyme
Location: 63711 - 65570 (+)
Gene ID: Rep_490_c_3_38
Type: CAZyme
Location: 65591 - 67780 (+)
Type: CAZyme
Location: 65591 - 67780 (+)
Gene ID: Rep_490_c_3_39
Type: pfam
Location: 67986 - 70394 (+)
Type: pfam
Location: 67986 - 70394 (+)
Gene ID: Rep_490_c_3_40
Type: pfam
Location: 70877 - 71422 (-)
Type: pfam
Location: 70877 - 71422 (-)
Gene ID: Rep_490_c_3_41
Type: TC
Location: 71462 - 73894 (-)
Type: TC
Location: 71462 - 73894 (-)
Gene ID: Rep_490_c_3_42
Type:
Location: 73980 - 74099 (+)
Type:
Location: 73980 - 74099 (+)
Gene ID: Rep_490_c_3_43
Type: CAZyme
Location: 74114 - 76813 (+)
Type: CAZyme
Location: 74114 - 76813 (+)
Gene ID: Rep_490_c_3_44
Type: CAZyme
Location: 76966 - 81204 (+)
Type: CAZyme
Location: 76966 - 81204 (+)
Gene ID: Rep_490_c_3_45
Type: TF
Location: 81418 - 82263 (+)
Type: TF
Location: 81418 - 82263 (+)
Gene ID: Rep_490_c_3_46
Type: TC
Location: 82260 - 83759 (-)
Type: TC
Location: 82260 - 83759 (-)
Gene ID: Rep_490_c_3_47
Type: pfam
Location: 84073 - 85590 (-)
Type: pfam
Location: 84073 - 85590 (-)
Gene ID: Rep_490_c_3_48
Type: CAZyme
Location: 85741 - 87303 (+)
Type: CAZyme
Location: 85741 - 87303 (+)
Gene ID: Rep_490_c_3_49
Type: CAZyme
Location: 87333 - 89018 (+)
Type: CAZyme
Location: 87333 - 89018 (+)
Gene ID: Rep_490_c_3_50
Type: CAZyme
Location: 89070 - 91922 (+)
Type: CAZyme
Location: 89070 - 91922 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.