Cluster: PUL0162_Rep_490_C0
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate: alpha-mannan
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_06394
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | PUL0162_Rep_490_C0 | Rep_490_c_2_2541 | 3343059 | 3345638 | + | NULL(UNKNOWN) |
| TC | PUL0162_Rep_490_C0 | Rep_490_c_2_2542 | 3346105 | 3349236 | + | 1.B.14.6.1 |
| pfam | PUL0162_Rep_490_C0 | Rep_490_c_2_2543 | 3349248 | 3351179 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0162_Rep_490_C0 | Rep_490_c_2_2544 | 3351208 | 3351903 | + | DUF3823 | DUF3823_C |
| pfam | PUL0162_Rep_490_C0 | Rep_490_c_2_2545 | 3351922 | 3353829 | + | GxGYxYP_C | GxGYxYP_N |
| CAZyme | PUL0162_Rep_490_C0 | Rep_490_c_2_2546 | 3353867 | 3356128 | + | GH92 |
| pfam | PUL0162_Rep_490_C0 | Rep_490_c_2_2547 | 3356167 | 3358143 | + | GxGYxYP_C | GxGYxYP_N | GxGYxYP_N_2nd | GxGYxYP_N_3rd |
| pfam | PUL0162_Rep_490_C0 | Rep_490_c_2_2548 | 3358177 | 3359307 | + | Laminin_G_3 | DUF4972 |
| pfam | PUL0162_Rep_490_C0 | Rep_490_c_2_2549 | 3359334 | 3360476 | + | Laminin_G_3 | DUF4972 |
| CAZyme | PUL0162_Rep_490_C0 | Rep_490_c_2_2550 | 3360551 | 3361699 | + | GH99 |
| TC | PUL0162_Rep_490_C0 | Rep_490_c_2_2551 | 3361780 | 3364155 | + | 9.B.14.1.10 |
| pfam | PUL0162_Rep_490_C0 | Rep_490_c_2_2552 | 3364236 | 3365336 | - | tRNA-synt_1b |
Gene ID: Rep_490_c_2_2541
Type: null
Location: 3343059 - 3345638 (+)
Type: null
Location: 3343059 - 3345638 (+)
Gene ID: Rep_490_c_2_2542
Type: TC
Location: 3346105 - 3349236 (+)
Type: TC
Location: 3346105 - 3349236 (+)
Gene ID: Rep_490_c_2_2543
Type: pfam
Location: 3349248 - 3351179 (+)
Type: pfam
Location: 3349248 - 3351179 (+)
Gene ID: Rep_490_c_2_2544
Type: pfam
Location: 3351208 - 3351903 (+)
Type: pfam
Location: 3351208 - 3351903 (+)
Gene ID: Rep_490_c_2_2545
Type: pfam
Location: 3351922 - 3353829 (+)
Type: pfam
Location: 3351922 - 3353829 (+)
Gene ID: Rep_490_c_2_2546
Type: CAZyme
Location: 3353867 - 3356128 (+)
Type: CAZyme
Location: 3353867 - 3356128 (+)
Gene ID: Rep_490_c_2_2547
Type: pfam
Location: 3356167 - 3358143 (+)
Type: pfam
Location: 3356167 - 3358143 (+)
Gene ID: Rep_490_c_2_2548
Type: pfam
Location: 3358177 - 3359307 (+)
Type: pfam
Location: 3358177 - 3359307 (+)
Gene ID: Rep_490_c_2_2549
Type: pfam
Location: 3359334 - 3360476 (+)
Type: pfam
Location: 3359334 - 3360476 (+)
Gene ID: Rep_490_c_2_2550
Type: CAZyme
Location: 3360551 - 3361699 (+)
Type: CAZyme
Location: 3360551 - 3361699 (+)
Gene ID: Rep_490_c_2_2551
Type: TC
Location: 3361780 - 3364155 (+)
Type: TC
Location: 3361780 - 3364155 (+)
Gene ID: Rep_490_c_2_2552
Type: pfam
Location: 3364236 - 3365336 (-)
Type: pfam
Location: 3364236 - 3365336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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