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Cluster: Rep_490_CGC90

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_490_c_2 Rep_490_c_2_3847 5069497 5070603 + GT4
CAZyme Rep_490_c_2 Rep_490_c_2_3848 5070760 5071584 + GT2
TC Rep_490_c_2 Rep_490_c_2_3849 5071642 5073048 + 9.B.18.1.1
TC Rep_490_c_2 Rep_490_c_2_3850 5073102 5073902 + 1.B.18.3.3
TC Rep_490_c_2 Rep_490_c_2_3851 5073915 5076353 + 8.A.3.3.4
TC Rep_490_c_2 Rep_490_c_2_3852 5076604 5079348 + 1.B.14.6.1
TC Rep_490_c_2 Rep_490_c_2_3853 5079367 5081100 + 8.A.46.1.1
pfam Rep_490_c_2 Rep_490_c_2_3854 5081237 5082421 - DnaJ | DnaJ_CXXCXGXG | DnaJ_C
TC Rep_490_c_2 Rep_490_c_2_3855 5082449 5083030 - 3.A.8.1.1
TC Rep_490_c_2 Rep_490_c_2_3856 5083234 5084853 + 3.A.1.121.4
pfam Rep_490_c_2 Rep_490_c_2_3857 5085984 5087033 - LRR_5 | LRR_5
TC Rep_490_c_2 Rep_490_c_2_3858 5087137 5088033 + 9.B.2.1.6
Gene ID: Rep_490_c_2_3847
Type: CAZyme
Location: 5069497 - 5070603 (+)
Gene ID: Rep_490_c_2_3848
Type: CAZyme
Location: 5070760 - 5071584 (+)
Gene ID: Rep_490_c_2_3849
Type: TC
Location: 5071642 - 5073048 (+)
Gene ID: Rep_490_c_2_3850
Type: TC
Location: 5073102 - 5073902 (+)
Gene ID: Rep_490_c_2_3851
Type: TC
Location: 5073915 - 5076353 (+)
Gene ID: Rep_490_c_2_3852
Type: TC
Location: 5076604 - 5079348 (+)
Gene ID: Rep_490_c_2_3853
Type: TC
Location: 5079367 - 5081100 (+)
Gene ID: Rep_490_c_2_3854
Type: pfam
Location: 5081237 - 5082421 (-)
Gene ID: Rep_490_c_2_3855
Type: TC
Location: 5082449 - 5083030 (-)
Gene ID: Rep_490_c_2_3856
Type: TC
Location: 5083234 - 5084853 (+)
Gene ID: Rep_490_c_2_3857
Type: pfam
Location: 5085984 - 5087033 (-)
Gene ID: Rep_490_c_2_3858
Type: TC
Location: 5087137 - 5088033 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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