Cluster: PUL0563_Rep_490_C0
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate: arabinogalactan
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_04144
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0563_Rep_490_C0 | Rep_490_c_2_2347 | 3088509 | 3090515 | - | GH127 |
| CAZyme | PUL0563_Rep_490_C0 | Rep_490_c_2_2348 | 3090552 | 3091553 | - | GH43_34 |
| pfam | PUL0563_Rep_490_C0 | Rep_490_c_2_2349 | 3091765 | 3093525 | + | BNR_4 |
| CAZyme | PUL0563_Rep_490_C0 | Rep_490_c_2_2350 | 3093522 | 3095543 | + | GH154 |
| TF | PUL0563_Rep_490_C0 | Rep_490_c_2_2351 | 3095777 | 3099922 | + | HTH_AraC |
| pfam | PUL0563_Rep_490_C0 | Rep_490_c_2_2352 | 3100564 | 3101856 | + | TIG |
| TC | PUL0563_Rep_490_C0 | Rep_490_c_2_2353 | 3101877 | 3104978 | + | 1.B.14.6.1 |
| pfam | PUL0563_Rep_490_C0 | Rep_490_c_2_2354 | 3104991 | 3107006 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0563_Rep_490_C0 | Rep_490_c_2_2355 | 3107028 | 3107915 | + | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| CAZyme | PUL0563_Rep_490_C0 | Rep_490_c_2_2356 | 3108210 | 3110105 | + | GH16_3 | GH43_24 |
| CAZyme | PUL0563_Rep_490_C0 | Rep_490_c_2_2357 | 3110359 | 3111426 | + | GH43_24 |
| CAZyme | PUL0563_Rep_490_C0 | Rep_490_c_2_2358 | 3111430 | 3112725 | + | PL42 |
| CAZyme | PUL0563_Rep_490_C0 | Rep_490_c_2_2359 | 3112730 | 3113875 | + | GH105 |
| pfam | PUL0563_Rep_490_C0 | Rep_490_c_2_2360 | 3113858 | 3114877 | - | Acetyltransf_1 | Acetyltransf_9 |
Gene ID: Rep_490_c_2_2347
Type: CAZyme
Location: 3088509 - 3090515 (-)
Type: CAZyme
Location: 3088509 - 3090515 (-)
Gene ID: Rep_490_c_2_2348
Type: CAZyme
Location: 3090552 - 3091553 (-)
Type: CAZyme
Location: 3090552 - 3091553 (-)
Gene ID: Rep_490_c_2_2349
Type: pfam
Location: 3091765 - 3093525 (+)
Type: pfam
Location: 3091765 - 3093525 (+)
Gene ID: Rep_490_c_2_2350
Type: CAZyme
Location: 3093522 - 3095543 (+)
Type: CAZyme
Location: 3093522 - 3095543 (+)
Gene ID: Rep_490_c_2_2351
Type: TF
Location: 3095777 - 3099922 (+)
Type: TF
Location: 3095777 - 3099922 (+)
Gene ID: Rep_490_c_2_2352
Type: pfam
Location: 3100564 - 3101856 (+)
Type: pfam
Location: 3100564 - 3101856 (+)
Gene ID: Rep_490_c_2_2353
Type: TC
Location: 3101877 - 3104978 (+)
Type: TC
Location: 3101877 - 3104978 (+)
Gene ID: Rep_490_c_2_2354
Type: pfam
Location: 3104991 - 3107006 (+)
Type: pfam
Location: 3104991 - 3107006 (+)
Gene ID: Rep_490_c_2_2355
Type: pfam
Location: 3107028 - 3107915 (+)
Type: pfam
Location: 3107028 - 3107915 (+)
Gene ID: Rep_490_c_2_2356
Type: CAZyme
Location: 3108210 - 3110105 (+)
Type: CAZyme
Location: 3108210 - 3110105 (+)
Gene ID: Rep_490_c_2_2357
Type: CAZyme
Location: 3110359 - 3111426 (+)
Type: CAZyme
Location: 3110359 - 3111426 (+)
Gene ID: Rep_490_c_2_2358
Type: CAZyme
Location: 3111430 - 3112725 (+)
Type: CAZyme
Location: 3111430 - 3112725 (+)
Gene ID: Rep_490_c_2_2359
Type: CAZyme
Location: 3112730 - 3113875 (+)
Type: CAZyme
Location: 3112730 - 3113875 (+)
Gene ID: Rep_490_c_2_2360
Type: pfam
Location: 3113858 - 3114877 (-)
Type: pfam
Location: 3113858 - 3114877 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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