dbCAN Logo

Cluster: Rep_490_CGC101

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_490_c_4 Rep_490_c_4_103 120295 120990 - 3.A.1.106.6
STP Rep_490_c_4 Rep_490_c_4_104 121103 121447 - TetR_N
CAZyme Rep_490_c_4 Rep_490_c_4_105 121636 123939 - GH20
pfam Rep_490_c_4 Rep_490_c_4_106 124118 124687 - OmdA
TC Rep_490_c_4 Rep_490_c_4_107 124968 127307 - 1.B.14.1.4
NULL(UNKNOWN) Rep_490_c_4 Rep_490_c_4_108 127404 127721 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_490_c_4 Rep_490_c_4_109 127867 130194 - 1.B.14.1.4
TC Rep_490_c_4 Rep_490_c_4_110 130716 132314 - 2.A.81.1.2
TC Rep_490_c_4 Rep_490_c_4_111 132363 133262 - 2.A.4.1.7
Gene ID: Rep_490_c_4_103
Type: TC
Location: 120295 - 120990 (-)
Gene ID: Rep_490_c_4_104
Type: STP
Location: 121103 - 121447 (-)
Gene ID: Rep_490_c_4_105
Type: CAZyme
Location: 121636 - 123939 (-)
Gene ID: Rep_490_c_4_106
Type: pfam
Location: 124118 - 124687 (-)
Gene ID: Rep_490_c_4_107
Type: TC
Location: 124968 - 127307 (-)
Gene ID: Rep_490_c_4_108
Type:
Location: 127404 - 127721 (-)
Gene ID: Rep_490_c_4_109
Type: TC
Location: 127867 - 130194 (-)
Gene ID: Rep_490_c_4_110
Type: TC
Location: 130716 - 132314 (-)
Gene ID: Rep_490_c_4_111
Type: TC
Location: 132363 - 133262 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_490_c_4_106 vegan > omnivore 1.36666 0.00365
Rep_490_c_4_106 vegetarian > omnivore 1.15925 0.00572

🧭 Explore Read Mapping of CGC

← Back to Cluster List