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Cluster: Rep_490_CGC83

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_490_c_2 Rep_490_c_2_3615 4775350 4778466 + 2.A.6.3.6
TC Rep_490_c_2 Rep_490_c_2_3616 4778469 4783178 + 2.A.6.3.6
NULL(UNKNOWN) Rep_490_c_2 Rep_490_c_2_3617 4783194 4783895 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_490_c_2 Rep_490_c_2_3618 4784045 4786261 - Patatin | Omp85_2
TC Rep_490_c_2 Rep_490_c_2_3619 4786534 4787769 + 2.A.6.2.29
TC Rep_490_c_2 Rep_490_c_2_3620 4787773 4790877 + 2.A.6.2.22
TC Rep_490_c_2 Rep_490_c_2_3621 4790877 4792250 + 2.A.6.2.46
pfam Rep_490_c_2 Rep_490_c_2_3622 4792379 4794025 + PFK
CAZyme Rep_490_c_2 Rep_490_c_2_3623 4794183 4795076 + GH25
Gene ID: Rep_490_c_2_3615
Type: TC
Location: 4775350 - 4778466 (+)
Gene ID: Rep_490_c_2_3616
Type: TC
Location: 4778469 - 4783178 (+)
Gene ID: Rep_490_c_2_3617
Type:
Location: 4783194 - 4783895 (+)
Gene ID: Rep_490_c_2_3618
Type: pfam
Location: 4784045 - 4786261 (-)
Gene ID: Rep_490_c_2_3619
Type: TC
Location: 4786534 - 4787769 (+)
Gene ID: Rep_490_c_2_3620
Type: TC
Location: 4787773 - 4790877 (+)
Gene ID: Rep_490_c_2_3621
Type: TC
Location: 4790877 - 4792250 (+)
Gene ID: Rep_490_c_2_3622
Type: pfam
Location: 4792379 - 4794025 (+)
Gene ID: Rep_490_c_2_3623
Type: CAZyme
Location: 4794183 - 4795076 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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