Genome Details
Selected Rep_genome_ID: HRGMv2_4639
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_B
Species
Pseudomonas_B oryzihabitans
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4639 | 4,745,927 | 99.22% | 0.385% | Ethiopia | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4639_CGC12 | CGCFAM_00002 | Yes | 4 | 2 | |
| HRGMv2_4639_CGC16 | CGCFAM_00185 | Yes | 3 | 1 | |
| HRGMv2_4639_CGC19 | CGCFAM_00344 | Yes | 3 | 1 | |
| HRGMv2_4639_CGC13 | CGCFAM_01364 | Yes | 5 | 1 | |
| HRGMv2_4639_CGC8 | CGCFAM_01441 | Yes | 4 | 1 | |
| HRGMv2_4639_CGC42 | CGCFAM_01642 | Yes | 3 | 1 | |
| HRGMv2_4639_CGC22 | CGCFAM_02170 | Yes | 4 | 1 | |
| HRGMv2_4639_CGC37 | CGCFAM_03723 | Yes | 3 | 1 | |
| HRGMv2_4639_CGC3 | CGCFAM_04957 | Yes | 8 | 5 | |
| HRGMv2_4639_CGC38 | CGCFAM_05790 | Yes | 6 | 1 | |
| HRGMv2_4639_CGC34 | CGCFAM_05828 | Yes | 6 | 1 | |
| HRGMv2_4639_CGC7 | CGCFAM_08629 | Yes | 4 | 1 | |
| HRGMv2_4639_CGC18 | CGCFAM_09159 | Yes | 14 | 9 |
Top CAZyme Families