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Cluster: HRGMv2_4639_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_48 61037 62236 - GT4
NULL(UNKNOWN) HRGMv2_4639_1 HRGMv2_4639_1_49 62282 62596 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_50 62634 63722 - GT4
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_51 63753 65000 - GT4
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_52 64997 65995 - GT2
pfam HRGMv2_4639_1 HRGMv2_4639_1_53 66029 66559 - NusG
TC HRGMv2_4639_1 HRGMv2_4639_1_54 66607 68820 - 8.A.3.3.1
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_55 68878 69813 - GT2
Gene ID: HRGMv2_4639_1_48
Type: CAZyme
Location: 61037 - 62236 (-)
Gene ID: HRGMv2_4639_1_49
Type:
Location: 62282 - 62596 (-)
Gene ID: HRGMv2_4639_1_50
Type: CAZyme
Location: 62634 - 63722 (-)
Gene ID: HRGMv2_4639_1_51
Type: CAZyme
Location: 63753 - 65000 (-)
Gene ID: HRGMv2_4639_1_52
Type: CAZyme
Location: 64997 - 65995 (-)
Gene ID: HRGMv2_4639_1_53
Type: pfam
Location: 66029 - 66559 (-)
Gene ID: HRGMv2_4639_1_54
Type: TC
Location: 66607 - 68820 (-)
Gene ID: HRGMv2_4639_1_55
Type: CAZyme
Location: 68878 - 69813 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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