Genome Details
Selected Rep_genome_ID: HRGMv2_4627
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E parakoreensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4627 | 6,541,893 | 99.66% | 0.774% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4627_CGC33 | CGCFAM_00003 | Yes | 9 | 3 | |
| HRGMv2_4627_CGC43 | CGCFAM_00011 | Yes | 5 | 3 | |
| HRGMv2_4627_CGC3 | CGCFAM_00144 | Yes | 17 | 5 | |
| HRGMv2_4627_CGC42 | CGCFAM_00281 | Yes | 4 | 2 | |
| HRGMv2_4627_CGC6 | CGCFAM_00294 | Yes | 7 | 2 | |
| HRGMv2_4627_CGC24 | CGCFAM_00359 | Yes | 6 | 1 | |
| HRGMv2_4627_CGC1 | CGCFAM_00529 | Yes | 5 | 3 | |
| HRGMv2_4627_CGC7 | CGCFAM_01364 | Yes | 9 | 1 | |
| HRGMv2_4627_CGC21 | CGCFAM_01454 | Yes | 4 | 1 | |
| HRGMv2_4627_CGC9 | CGCFAM_03103 | Yes | 8 | 3 | |
| HRGMv2_4627_CGC10 | CGCFAM_03927 | Yes | 6 | 1 | |
| HRGMv2_4627_CGC25 | CGCFAM_05829 | Yes | 3 | 1 | |
| HRGMv2_4627_CGC12 | CGCFAM_06213 | Yes | 3 | 1 | |
| HRGMv2_4627_CGC2 | CGCFAM_06214 | Yes | 11 | 5 |
Top CAZyme Families