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Cluster: HRGMv2_4627_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4627_2 HRGMv2_4627_2_248 294108 296678 + GT2
TC HRGMv2_4627_2 HRGMv2_4627_2_249 296887 297684 + 3.A.1.3.3
TC HRGMv2_4627_2 HRGMv2_4627_2_250 297814 298773 + 3.A.1.3.17
TC HRGMv2_4627_2 HRGMv2_4627_2_251 298766 299500 + 3.A.1.3.15
TC HRGMv2_4627_2 HRGMv2_4627_2_252 299655 301571 - 1.B.52.2.1
pfam HRGMv2_4627_2 HRGMv2_4627_2_253 301773 302480 - Methyltrans_RNA
TC HRGMv2_4627_2 HRGMv2_4627_2_254 302477 303268 - 2.A.64.1.1
pfam HRGMv2_4627_2 HRGMv2_4627_2_255 303265 303729 - TatA_B_E
TC HRGMv2_4627_2 HRGMv2_4627_2_256 303739 304020 - 2.A.64.1.1
Gene ID: HRGMv2_4627_2_248
Type: CAZyme
Location: 294108 - 296678 (+)
Gene ID: HRGMv2_4627_2_249
Type: TC
Location: 296887 - 297684 (+)
Gene ID: HRGMv2_4627_2_250
Type: TC
Location: 297814 - 298773 (+)
Gene ID: HRGMv2_4627_2_251
Type: TC
Location: 298766 - 299500 (+)
Gene ID: HRGMv2_4627_2_252
Type: TC
Location: 299655 - 301571 (-)
Gene ID: HRGMv2_4627_2_253
Type: pfam
Location: 301773 - 302480 (-)
Gene ID: HRGMv2_4627_2_254
Type: TC
Location: 302477 - 303268 (-)
Gene ID: HRGMv2_4627_2_255
Type: pfam
Location: 303265 - 303729 (-)
Gene ID: HRGMv2_4627_2_256
Type: TC
Location: 303739 - 304020 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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