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Cluster: HRGMv2_4627_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4627_2 HRGMv2_4627_2_348 418389 419519 + GT4
pfam HRGMv2_4627_2 HRGMv2_4627_2_349 419519 420415 + Mig-14 | Acetyltransf_6
STP HRGMv2_4627_2 HRGMv2_4627_2_350 420424 421860 + PIG-L
CAZyme HRGMv2_4627_2 HRGMv2_4627_2_351 421857 423011 + GT4
CAZyme HRGMv2_4627_2 HRGMv2_4627_2_352 423008 423910 + GT2
pfam HRGMv2_4627_2 HRGMv2_4627_2_353 423929 425146 - Acyl_transf_3
pfam HRGMv2_4627_2 HRGMv2_4627_2_354 425146 427008 - Wzy_C | Kdo
TC HRGMv2_4627_2 HRGMv2_4627_2_355 427162 428964 + 3.A.1.106.1
Gene ID: HRGMv2_4627_2_348
Type: CAZyme
Location: 418389 - 419519 (+)
Gene ID: HRGMv2_4627_2_349
Type: pfam
Location: 419519 - 420415 (+)
Gene ID: HRGMv2_4627_2_350
Type: STP
Location: 420424 - 421860 (+)
Gene ID: HRGMv2_4627_2_351
Type: CAZyme
Location: 421857 - 423011 (+)
Gene ID: HRGMv2_4627_2_352
Type: CAZyme
Location: 423008 - 423910 (+)
Gene ID: HRGMv2_4627_2_353
Type: pfam
Location: 423929 - 425146 (-)
Gene ID: HRGMv2_4627_2_354
Type: pfam
Location: 425146 - 427008 (-)
Gene ID: HRGMv2_4627_2_355
Type: TC
Location: 427162 - 428964 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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