dbCAN Logo

Cluster: HRGMv2_4627_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4627_17 HRGMv2_4627_17_71 74883 80183 - GT2
TC HRGMv2_4627_17 HRGMv2_4627_17_72 80292 81665 - 3.A.1.103.5
pfam HRGMv2_4627_17 HRGMv2_4627_17_73 81655 82473 - ABC2_membrane
CAZyme HRGMv2_4627_17 HRGMv2_4627_17_74 83250 86978 - GT2 | GT99
TC HRGMv2_4627_17 HRGMv2_4627_17_75 86981 88240 - 3.A.1.103.6
TC HRGMv2_4627_17 HRGMv2_4627_17_76 88240 89028 - 3.A.1.104.1
TC HRGMv2_4627_17 HRGMv2_4627_17_77 89369 90388 - 9.B.146.1.2
pfam HRGMv2_4627_17 HRGMv2_4627_17_78 90385 91347 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme HRGMv2_4627_17 HRGMv2_4627_17_79 91344 92267 - GT2
Gene ID: HRGMv2_4627_17_71
Type: CAZyme
Location: 74883 - 80183 (-)
Gene ID: HRGMv2_4627_17_72
Type: TC
Location: 80292 - 81665 (-)
Gene ID: HRGMv2_4627_17_73
Type: pfam
Location: 81655 - 82473 (-)
Gene ID: HRGMv2_4627_17_74
Type: CAZyme
Location: 83250 - 86978 (-)
Gene ID: HRGMv2_4627_17_75
Type: TC
Location: 86981 - 88240 (-)
Gene ID: HRGMv2_4627_17_76
Type: TC
Location: 88240 - 89028 (-)
Gene ID: HRGMv2_4627_17_77
Type: TC
Location: 89369 - 90388 (-)
Gene ID: HRGMv2_4627_17_78
Type: pfam
Location: 90385 - 91347 (-)
Gene ID: HRGMv2_4627_17_79
Type: CAZyme
Location: 91344 - 92267 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List