Genome Details
Selected Rep_genome_ID: HRGMv2_2681
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR011089 | 1,978,521 | 93.13% | 1.02% | China | Asia | CGMR |
| DM060_34 | 3,031,896 | 98.98% | 2.78% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2681 | 2,724,024 | 100% | 0% | Ghana | Africa | HRGM |
| MGYG000002610 | 2,250,349 | 93.03% | 0% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2681_CGC6 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| HRGMv2_2681_CGC4 | CGCFAM_00063 | Yes | 10 | 2 | |
| HRGMv2_2681_CGC1 | CGCFAM_00132 | Yes | 10 | 4 | |
| HRGMv2_2681_CGC26 | CGCFAM_00160 | Yes | 7 | 1 | alpha-glucan |
| HRGMv2_2681_CGC20 | CGCFAM_00203 | Yes | 5 | 1 | |
| HRGMv2_2681_CGC8 | CGCFAM_00335 | Yes | 7 | 2 | |
| HRGMv2_2681_CGC24 | CGCFAM_00342 | Yes | 5 | 2 | |
| HRGMv2_2681_CGC16 | CGCFAM_00605 | Yes | 6 | 2 | |
| HRGMv2_2681_CGC7 | CGCFAM_00688 | Yes | 12 | 1 | |
| HRGMv2_2681_CGC25 | CGCFAM_00871 | Yes | 9 | 4 | |
| HRGMv2_2681_CGC5 | CGCFAM_01009 | Yes | 11 | 1 | |
| HRGMv2_2681_CGC18 | CGCFAM_02493 | Yes | 4 | 2 | |
| HRGMv2_2681_CGC11 | CGCFAM_03646 | Yes | 9 | 1 | |
| HRGMv2_2681_CGC2 | CGCFAM_04448 | Yes | 9 | 2 |
Top CAZyme Families