Cluster: HRGMv2_2681_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2681
- CGC Family ID: CGCFAM_00342
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2681_24 | HRGMv2_2681_24_2 | 1686 | 2963 | + | 3.A.1.1.44 |
| TC | HRGMv2_2681_24 | HRGMv2_2681_24_3 | 2987 | 3871 | + | 3.A.1.1.25 |
| TC | HRGMv2_2681_24 | HRGMv2_2681_24_4 | 3875 | 4711 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_2681_24 | HRGMv2_2681_24_5 | 4821 | 7067 | + | GH36 |
| CAZyme | HRGMv2_2681_24 | HRGMv2_2681_24_6 | 7074 | 8900 | + | GH13_4 |
Gene ID: HRGMv2_2681_24_2
Type: TC
Location: 1686 - 2963 (+)
Type: TC
Location: 1686 - 2963 (+)
Gene ID: HRGMv2_2681_24_3
Type: TC
Location: 2987 - 3871 (+)
Type: TC
Location: 2987 - 3871 (+)
Gene ID: HRGMv2_2681_24_4
Type: TC
Location: 3875 - 4711 (+)
Type: TC
Location: 3875 - 4711 (+)
Gene ID: HRGMv2_2681_24_5
Type: CAZyme
Location: 4821 - 7067 (+)
Type: CAZyme
Location: 4821 - 7067 (+)
Gene ID: HRGMv2_2681_24_6
Type: CAZyme
Location: 7074 - 8900 (+)
Type: CAZyme
Location: 7074 - 8900 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.