Cluster: HRGMv2_2681_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2681
- CGC Family ID: CGCFAM_00688
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2681_3 | HRGMv2_2681_3_77 | 90864 | 92495 | - | 8.A.7.1.5 |
| pfam | HRGMv2_2681_3 | HRGMv2_2681_3_78 | 92482 | 93666 | - | Patatin |
| pfam | HRGMv2_2681_3 | HRGMv2_2681_3_79 | 93847 | 94497 | + | Hydrolase | HAD | HAD_2 |
| CAZyme | HRGMv2_2681_3 | HRGMv2_2681_3_80 | 94595 | 95617 | + | GT2 |
| TF | HRGMv2_2681_3 | HRGMv2_2681_3_81 | 95830 | 96549 | - | LytTR |
| peptidase | HRGMv2_2681_3 | HRGMv2_2681_3_82 | 96788 | 98587 | - | M24.UPB |
| TC | HRGMv2_2681_3 | HRGMv2_2681_3_83 | 98906 | 100177 | + | 9.B.10.1.1 |
| pfam | HRGMv2_2681_3 | HRGMv2_2681_3_84 | 100215 | 101177 | + | cobW | DUF1980_C |
| NULL(UNKNOWN) | HRGMv2_2681_3 | HRGMv2_2681_3_85 | 101206 | 101658 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2681_3 | HRGMv2_2681_3_86 | 101748 | 102722 | - | 2.A.19.5.2 |
| NULL(UNKNOWN) | HRGMv2_2681_3 | HRGMv2_2681_3_87 | 102818 | 103165 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2681_3 | HRGMv2_2681_3_88 | 103181 | 104461 | - | 2.A.47.4.7 |
Gene ID: HRGMv2_2681_3_77
Type: TC
Location: 90864 - 92495 (-)
Type: TC
Location: 90864 - 92495 (-)
Gene ID: HRGMv2_2681_3_78
Type: pfam
Location: 92482 - 93666 (-)
Type: pfam
Location: 92482 - 93666 (-)
Gene ID: HRGMv2_2681_3_79
Type: pfam
Location: 93847 - 94497 (+)
Type: pfam
Location: 93847 - 94497 (+)
Gene ID: HRGMv2_2681_3_80
Type: CAZyme
Location: 94595 - 95617 (+)
Type: CAZyme
Location: 94595 - 95617 (+)
Gene ID: HRGMv2_2681_3_81
Type: TF
Location: 95830 - 96549 (-)
Type: TF
Location: 95830 - 96549 (-)
Gene ID: HRGMv2_2681_3_82
Type: peptidase
Location: 96788 - 98587 (-)
Type: peptidase
Location: 96788 - 98587 (-)
Gene ID: HRGMv2_2681_3_83
Type: TC
Location: 98906 - 100177 (+)
Type: TC
Location: 98906 - 100177 (+)
Gene ID: HRGMv2_2681_3_84
Type: pfam
Location: 100215 - 101177 (+)
Type: pfam
Location: 100215 - 101177 (+)
Gene ID: HRGMv2_2681_3_85
Type:
Location: 101206 - 101658 (+)
Type:
Location: 101206 - 101658 (+)
Gene ID: HRGMv2_2681_3_86
Type: TC
Location: 101748 - 102722 (-)
Type: TC
Location: 101748 - 102722 (-)
Gene ID: HRGMv2_2681_3_87
Type:
Location: 102818 - 103165 (-)
Type:
Location: 102818 - 103165 (-)
Gene ID: HRGMv2_2681_3_88
Type: TC
Location: 103181 - 104461 (-)
Type: TC
Location: 103181 - 104461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.