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Cluster: HRGMv2_2681_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2681_1 HRGMv2_2681_1_109 121816 122787 - 3.A.1.1.48
TC HRGMv2_2681_1 HRGMv2_2681_1_110 122802 123698 - 3.A.1.1.36
STP HRGMv2_2681_1 HRGMv2_2681_1_111 123830 125182 - SBP_bac_1
TF HRGMv2_2681_1 HRGMv2_2681_1_112 125668 126513 + HTH_6
CAZyme HRGMv2_2681_1 HRGMv2_2681_1_113 126605 127750 - GH105
CAZyme HRGMv2_2681_1 HRGMv2_2681_1_114 127754 129310 - GH28
TF HRGMv2_2681_1 HRGMv2_2681_1_115 129421 130239 + HTH_AraC | HTH_AraC
TC HRGMv2_2681_1 HRGMv2_2681_1_116 130323 131180 - 3.A.1.1.11
TC HRGMv2_2681_1 HRGMv2_2681_1_117 131191 132120 - 3.A.1.1.11
Gene ID: HRGMv2_2681_1_109
Type: TC
Location: 121816 - 122787 (-)
Gene ID: HRGMv2_2681_1_110
Type: TC
Location: 122802 - 123698 (-)
Gene ID: HRGMv2_2681_1_111
Type: STP
Location: 123830 - 125182 (-)
Gene ID: HRGMv2_2681_1_112
Type: TF
Location: 125668 - 126513 (+)
Gene ID: HRGMv2_2681_1_113
Type: CAZyme
Location: 126605 - 127750 (-)
Gene ID: HRGMv2_2681_1_114
Type: CAZyme
Location: 127754 - 129310 (-)
Gene ID: HRGMv2_2681_1_115
Type: TF
Location: 129421 - 130239 (+)
Gene ID: HRGMv2_2681_1_116
Type: TC
Location: 130323 - 131180 (-)
Gene ID: HRGMv2_2681_1_117
Type: TC
Location: 131191 - 132120 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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