Cluster: HRGMv2_2681_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2681
- CGC Family ID: CGCFAM_00203
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2681_16 | HRGMv2_2681_16_7 | 8012 | 8911 | + | 3.A.1.1.4 |
| TC | HRGMv2_2681_16 | HRGMv2_2681_16_8 | 8904 | 9767 | + | 3.A.1.1.4 |
| CAZyme | HRGMv2_2681_16 | HRGMv2_2681_16_9 | 9894 | 12977 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_2681_16 | HRGMv2_2681_16_10 | 13093 | 13953 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2681_16 | HRGMv2_2681_16_11 | 13963 | 14922 | - | 3.A.1.25.5 |
Gene ID: HRGMv2_2681_16_7
Type: TC
Location: 8012 - 8911 (+)
Type: TC
Location: 8012 - 8911 (+)
Gene ID: HRGMv2_2681_16_8
Type: TC
Location: 8904 - 9767 (+)
Type: TC
Location: 8904 - 9767 (+)
Gene ID: HRGMv2_2681_16_9
Type: CAZyme
Location: 9894 - 12977 (+)
Type: CAZyme
Location: 9894 - 12977 (+)
Gene ID: HRGMv2_2681_16_10
Type:
Location: 13093 - 13953 (-)
Type:
Location: 13093 - 13953 (-)
Gene ID: HRGMv2_2681_16_11
Type: TC
Location: 13963 - 14922 (-)
Type: TC
Location: 13963 - 14922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.