dbCAN Logo

Cluster: HRGMv2_2681_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2681_1 HRGMv2_2681_1_43 46985 48031 - 9.B.18.2.1
pfam HRGMv2_2681_1 HRGMv2_2681_1_44 48034 49446 - Polysacc_synt | Polysacc_synt_3
pfam HRGMv2_2681_1 HRGMv2_2681_1_45 49443 50552 - PS_pyruv_trans
CAZyme HRGMv2_2681_1 HRGMv2_2681_1_46 50549 51736 - GT4
pfam HRGMv2_2681_1 HRGMv2_2681_1_47 51746 52921 - Wzy_C
CAZyme HRGMv2_2681_1 HRGMv2_2681_1_48 52961 54121 - GT4
CAZyme HRGMv2_2681_1 HRGMv2_2681_1_49 54139 55230 - GT4
CAZyme HRGMv2_2681_1 HRGMv2_2681_1_50 55227 56438 - GT4
pfam HRGMv2_2681_1 HRGMv2_2681_1_51 56463 57521 - PS_pyruv_trans
TC HRGMv2_2681_1 HRGMv2_2681_1_52 58204 59559 - 9.B.18.1.3
Gene ID: HRGMv2_2681_1_43
Type: TC
Location: 46985 - 48031 (-)
Gene ID: HRGMv2_2681_1_44
Type: pfam
Location: 48034 - 49446 (-)
Gene ID: HRGMv2_2681_1_45
Type: pfam
Location: 49443 - 50552 (-)
Gene ID: HRGMv2_2681_1_46
Type: CAZyme
Location: 50549 - 51736 (-)
Gene ID: HRGMv2_2681_1_47
Type: pfam
Location: 51746 - 52921 (-)
Gene ID: HRGMv2_2681_1_48
Type: CAZyme
Location: 52961 - 54121 (-)
Gene ID: HRGMv2_2681_1_49
Type: CAZyme
Location: 54139 - 55230 (-)
Gene ID: HRGMv2_2681_1_50
Type: CAZyme
Location: 55227 - 56438 (-)
Gene ID: HRGMv2_2681_1_51
Type: pfam
Location: 56463 - 57521 (-)
Gene ID: HRGMv2_2681_1_52
Type: TC
Location: 58204 - 59559 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List