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Cluster: HRGMv2_2681_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2681_24 HRGMv2_2681_24_11 13164 15779 + CBM67 | GH78
pfam HRGMv2_2681_24 HRGMv2_2681_24_12 15889 16737 - AP_endonuc_2
CAZyme HRGMv2_2681_24 HRGMv2_2681_24_13 16741 18555 - CBM32 | GH43_28
CAZyme HRGMv2_2681_24 HRGMv2_2681_24_14 18560 20767 - GH2
pfam HRGMv2_2681_24 HRGMv2_2681_24_15 20849 22339 - MFS_2
CAZyme HRGMv2_2681_24 HRGMv2_2681_24_16 22568 23869 + GH1
STP HRGMv2_2681_24 HRGMv2_2681_24_17 23924 24460 - TetR_N
sulfatase HRGMv2_2681_24 HRGMv2_2681_24_18 24723 25730 + S1_2
TC HRGMv2_2681_24 HRGMv2_2681_24_19 25806 27152 + 2.A.66.1.13
Gene ID: HRGMv2_2681_24_11
Type: CAZyme
Location: 13164 - 15779 (+)
Gene ID: HRGMv2_2681_24_12
Type: pfam
Location: 15889 - 16737 (-)
Gene ID: HRGMv2_2681_24_13
Type: CAZyme
Location: 16741 - 18555 (-)
Gene ID: HRGMv2_2681_24_14
Type: CAZyme
Location: 18560 - 20767 (-)
Gene ID: HRGMv2_2681_24_15
Type: pfam
Location: 20849 - 22339 (-)
Gene ID: HRGMv2_2681_24_16
Type: CAZyme
Location: 22568 - 23869 (+)
Gene ID: HRGMv2_2681_24_17
Type: STP
Location: 23924 - 24460 (-)
Gene ID: HRGMv2_2681_24_18
Type: sulfatase
Location: 24723 - 25730 (+)
Gene ID: HRGMv2_2681_24_19
Type: TC
Location: 25806 - 27152 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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