Cluster: HRGMv2_2681_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2681
- CGC Family ID: CGCFAM_02493
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2681_13 | HRGMv2_2681_13_26 | 26245 | 27711 | + | 4.A.1.1.7 |
| CAZyme | HRGMv2_2681_13 | HRGMv2_2681_13_27 | 27929 | 29056 | + | CE9 |
| TC | HRGMv2_2681_13 | HRGMv2_2681_13_28 | 29186 | 29698 | - | 4.A.1.1.13 |
| CAZyme | HRGMv2_2681_13 | HRGMv2_2681_13_29 | 29880 | 32042 | - | GH112 |
Gene ID: HRGMv2_2681_13_26
Type: TC
Location: 26245 - 27711 (+)
Type: TC
Location: 26245 - 27711 (+)
Gene ID: HRGMv2_2681_13_27
Type: CAZyme
Location: 27929 - 29056 (+)
Type: CAZyme
Location: 27929 - 29056 (+)
Gene ID: HRGMv2_2681_13_28
Type: TC
Location: 29186 - 29698 (-)
Type: TC
Location: 29186 - 29698 (-)
Gene ID: HRGMv2_2681_13_29
Type: CAZyme
Location: 29880 - 32042 (-)
Type: CAZyme
Location: 29880 - 32042 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.