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Cluster: HRGMv2_2681_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2681_7 HRGMv2_2681_7_72 76353 77825 - GH77
TC HRGMv2_2681_7 HRGMv2_2681_7_73 77839 78681 - 3.A.1.1.45
TC HRGMv2_2681_7 HRGMv2_2681_7_74 78681 79532 - 3.A.1.1.45
TC HRGMv2_2681_7 HRGMv2_2681_7_75 79634 80974 - 3.A.1.1.45
TF HRGMv2_2681_7 HRGMv2_2681_7_76 81050 82057 - LacI
pfam HRGMv2_2681_7 HRGMv2_2681_7_77 82522 82779 - Ribosomal_S18
TC HRGMv2_2681_7 HRGMv2_2681_7_78 82826 83305 - 3.A.7.19.1
pfam HRGMv2_2681_7 HRGMv2_2681_7_79 83336 83620 - Ribosomal_S6
TC HRGMv2_2681_7 HRGMv2_2681_7_80 83898 85091 + 2.A.37.2.2
Gene ID: HRGMv2_2681_7_72
Type: CAZyme
Location: 76353 - 77825 (-)
Gene ID: HRGMv2_2681_7_73
Type: TC
Location: 77839 - 78681 (-)
Gene ID: HRGMv2_2681_7_74
Type: TC
Location: 78681 - 79532 (-)
Gene ID: HRGMv2_2681_7_75
Type: TC
Location: 79634 - 80974 (-)
Gene ID: HRGMv2_2681_7_76
Type: TF
Location: 81050 - 82057 (-)
Gene ID: HRGMv2_2681_7_77
Type: pfam
Location: 82522 - 82779 (-)
Gene ID: HRGMv2_2681_7_78
Type: TC
Location: 82826 - 83305 (-)
Gene ID: HRGMv2_2681_7_79
Type: pfam
Location: 83336 - 83620 (-)
Gene ID: HRGMv2_2681_7_80
Type: TC
Location: 83898 - 85091 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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