Cluster: HRGMv2_2681_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2681
- CGC Family ID: CGCFAM_00605
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2681_12 | HRGMv2_2681_12_46 | 46509 | 48278 | - | GH2 |
| TC | HRGMv2_2681_12 | HRGMv2_2681_12_47 | 49221 | 51140 | - | 3.A.1.135.5 |
| TC | HRGMv2_2681_12 | HRGMv2_2681_12_48 | 51140 | 52891 | - | 3.A.1.135.5 |
| TF | HRGMv2_2681_12 | HRGMv2_2681_12_49 | 53032 | 53514 | - | MarR |
| sulfatase | HRGMv2_2681_12 | HRGMv2_2681_12_50 | 53665 | 54636 | - | S1_15 |
| CAZyme | HRGMv2_2681_12 | HRGMv2_2681_12_51 | 54720 | 56159 | - | GH1 |
Gene ID: HRGMv2_2681_12_46
Type: CAZyme
Location: 46509 - 48278 (-)
Type: CAZyme
Location: 46509 - 48278 (-)
Gene ID: HRGMv2_2681_12_47
Type: TC
Location: 49221 - 51140 (-)
Type: TC
Location: 49221 - 51140 (-)
Gene ID: HRGMv2_2681_12_48
Type: TC
Location: 51140 - 52891 (-)
Type: TC
Location: 51140 - 52891 (-)
Gene ID: HRGMv2_2681_12_49
Type: TF
Location: 53032 - 53514 (-)
Type: TF
Location: 53032 - 53514 (-)
Gene ID: HRGMv2_2681_12_50
Type: sulfatase
Location: 53665 - 54636 (-)
Type: sulfatase
Location: 53665 - 54636 (-)
Gene ID: HRGMv2_2681_12_51
Type: CAZyme
Location: 54720 - 56159 (-)
Type: CAZyme
Location: 54720 - 56159 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.